Domain ID e4p54A1

Download files:
  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 001285195
Type: Automatic domain
Parent: e1jysA1
Range: A:0-230
Ligands: CL MTA
PDB: 4p54
PDB Description: Aminodeoxyfutalosine nucleosidase
UniProt: Q9ZMY2
Species:

Structure of domain e4p54A1

Structural contacts of domain e4p54A1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4p54A1 A:x,y,z->A:Y,X,-Z+2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:Y,X,-Z+2->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:x,y,z->A:Y,X,-Z+1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:Y,X,-Z+1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:x,y,z->A:-Y+1,X-Y+1,Z-1/3 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:-Y+1,X-Y+1,Z-1/3->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:x,y,z->A:-X+1,-X+Y,-Z+5/3 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:-X+1,-X+Y,-Z+5/3->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:x,y,z->A:X-Y,-Y+1,-Z+4/3 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4p54A1 A:X-Y,-Y+1,-Z+4/3->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol