Domain ID e4p5dA1

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  • A: a/b three-layered sandwiches
  • X: Flavodoxin-like
  • H: N-deoxyribosyltransferase
  • T: N-deoxyribosyltransferase
  • F: Nuc_deoxyrib_tr
UID: 001323555
Type: Automatic domain
Parent: e1f8yA1
Range: A:9-152
Ligands: N6P SO4
PDB: 4p5d
PDB Description: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1
UniProt: O35820
Hsap BLAST neighbor: O43598
Species: Rattus norvegicus

Structure of domain e4p5dA1

Structural contacts of domain e4p5dA1 of H-group "N-deoxyribosyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4p5dA1 A:x,y,z->A:Y,X,-Z-2/3 N-deoxyribosyltransferase Interaction Interface Pymol
e4p5dA1 A:Y,X,-Z-2/3->A:x,y,z N-deoxyribosyltransferase Interaction Interface Pymol
e4p5dA1 A:x,y,z->A:-Y+1,-X+1,-Z-1/6 N-deoxyribosyltransferase Interaction Interface Pymol
e4p5dA1 A:-Y+1,-X+1,-Z-1/6->A:x,y,z N-deoxyribosyltransferase Interaction Interface Pymol
e4p5dA1 A:x,y,z->A:Y,X,-Z+1/3 N-deoxyribosyltransferase Interaction Interface Pymol
e4p5dA1 A:Y,X,-Z+1/3->A:x,y,z N-deoxyribosyltransferase Interaction Interface Pymol