Domain ID e4p5tC2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 001293970
Type: Automatic domain
Parent: e1hdmA2
Range: C:0-81
PDB: 4p5t
PDB Description: H-2 class II histocompatibility antigen, A-B alpha chain
UniProt: P14434
Hsap BLAST neighbor: P01909
Species: Mus musculus

Structure of domain e4p5tC2

Domains in the same chain:

e4p5tC2 C:0-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p5tC1 C:82-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4p5tA1 A:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tA2 A:114-201 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tB1 B:1-114 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tB2 B:115-238 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tC2 C:0-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p5tC1 C:82-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tD2 D:4-84 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p5tD1 D:78-191 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tE1 E:2-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tE2 E:114-201 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tF1 F:1-114 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tF2 F:115-237 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tG2 G:0-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p5tG1 G:82-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p5tH2 H:4-84 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p5tH1 H:78-191 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4p5tC2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1hdmA2 C:X,Y,Z->D:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e4p5tD1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4p5tB1 C:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4p5tA1 C:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4p5tB2 C:-X,Y-1/2,-Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol