Domain ID e4p72B1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Anticodon-binding domain of PheRS
  • T: Anticodon-binding domain of PheRS
  • F: FDX-ACB
UID: 001298499
Type: Automatic domain
Parent: e1jjcB5
Range: B:686-791
PDB: 4p72
PDB Description: Phenylalanine--tRNA ligase beta subunit
UniProt: Q9I0A4
Species:

Structure of domain e4p72B1

Domains in the same chain:

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e4p72B3 B:1-41,B:142-178 HTH HTH Putative DNA-binding domain
e4p72B5 B:41-141 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4p72B2 B:179-390 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e4p72B4 B:391-472 HTH HTH Putative DNA-binding domain
e4p72B6 B:473-685 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e4p72B1 B:686-791 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS

Domains in the same PDB:

e4p72A3 A:1-41,A:142-178 HTH HTH Putative DNA-binding domain
e4p72A5 A:41-141 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4p72A2 A:179-390 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e4p72A4 A:391-472 HTH HTH Putative DNA-binding domain
e4p72A6 A:473-685 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e4p72A1 A:686-791 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS
e4p72B3 B:1-41,B:142-178 HTH HTH Putative DNA-binding domain
e4p72B5 B:41-141 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4p72B2 B:179-390 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e4p72B4 B:391-472 HTH HTH Putative DNA-binding domain
e4p72B6 B:473-685 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e4p72B1 B:686-791 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS
e4p72C1 C:11-259 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e4p72D1 D:8-259 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases

Structural contacts of domain e4p72B1 of H-group "Anticodon-binding domain of PheRS":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4p72C1 B:X,Y,Z->C:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e4p72A6 B:x,y,z->A:X,Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol
e4p72A3 B:x,y,z->A:-X+1,Y,-Z+1 HTH Interaction Interface Pymol
e4p72B1 B:x,y,z->B:-X+2,Y,-Z+1 Anticodon-binding domain of PheRS Interaction Interface Pymol
e4p72B1 B:-X+2,Y,-Z+1->B:x,y,z Anticodon-binding domain of PheRS Interaction Interface Pymol