ECOD: domain e4paaA5

Domain ID e4paaA5

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: FAD/NAD(P)-binding domain
F: DAO,FAO_M

UID:	001675605
Type:	Automatic domain
Parent:	e1pj5A4
Range:	A:38-257,A:369-458
Ligands:	FAD
PDB:	4paa
PDB Description:	Dimethylglycine dehydrogenase
UniProt:	Q63342
Hsap BLAST neighbor:	Q9UI17
Species:	Rattus norvegicus

Domain
In chain context
In PDB context

Structure of domain e4paaA5

Domains in the same chain:

Download Pymol

e4paaA5	A:38-257,A:369-458	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e4paaA3	A:258-368	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e4paaA4	A:459-761	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e4paaA1	A:762-853	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e4paaA5	A:38-257,A:369-458	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e4paaA3	A:258-368	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e4paaA4	A:459-761	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e4paaA1	A:762-853	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e4paaB4	B:38-257,B:369-458	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e4paaB3	B:258-368	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e4paaB5	B:459-761	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e4paaB2	B:762-853	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Structural contacts of domain e4paaA5 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1pj5A4	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e1pj5A4	A:-X+1/2,-Y,Z-1/2->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e4paaB3	A:-X,Y-1/2,-Z+1/2->B:x,y,z	FAD-linked reductases-C	Interaction Interface Pymol
e4paaB3	A:x,y,z->B:-X,Y-1/2,-Z+1/2	FAD-linked reductases-C	Interaction Interface Pymol