ECOD: domain e4pakA2

Domain ID e4pakA2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: DctP

UID:	001523494
Type:	Automatic domain
Parent:	e3gyyA1
Range:	A:32-155,A:246-335
Ligands:	PAF SO4
PDB:	4pak
PDB Description:	TRAP dicarboxylate transporter, DctP subunit
UniProt:	A1WPV4
Species:

Domains in the same chain:

Download Pymol

e4pakA2	A:32-155,A:246-335	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4pakA1	A:156-245	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e4pakA2	A:32-155,A:246-335	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4pakA1	A:156-245	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e4pakA2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4pakA2	A:x,y,z->A:-Y+1,X-Y+1,Z-1/3	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA2	A:-Y+1,X-Y+1,Z-1/3->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA1	A:-Y+1,X-Y+1,Z-1/3->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA1	A:x,y,z->A:Y,X,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA2	A:x,y,z->A:Y,X,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA1	A:Y,X,-Z+1->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA2	A:Y,X,-Z+1->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA2	A:x,y,z->A:-X+1,-X+Y,-Z+2/3	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA2	A:-X+1,-X+Y,-Z+2/3->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA1	A:-X+1,-X+Y,-Z+2/3->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA2	A:x,y,z->A:Y-1,X,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pakA2	A:Y-1,X,-Z+1->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol