Domain ID e4pd4K1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: V-set
UID: 001297254
Type: Automatic domain
Parent: e1mjuL1
Range: K:1-107
PDB: 4pd4
PDB Description: Ig kappa chain V-V region HP 124E1
UniProt: P01647
Hsap BLAST neighbor: P01594
Species: Mus musculus

Structure of domain e4pd4K1

Domains in the same chain:

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e4pd4K1 K:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4pd4A1 A:27-239 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e4pd4A2 A:240-457 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e4pd4B1 B:17-218 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e4pd4B2 B:219-368 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e4pd4C2 C:1-261 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e4pd4C1 C:262-385 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e4pd4D2 D:62-260 Cytochrome c-like Cytochrome c Cytochrome c
e4pd4D1 D:261-309 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e4pd4E3 E:31-88 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e4pd4E1 E:89-156,E:199-215 ISP domain ISP domain ISP domain
e4pd4E2 E:157-198 Trm112p-like Trm112p-like Trm112p-like
e4pd4F1 F:74-147 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e4pd4G1 G:2-127 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e4pd4H1 H:2-94 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e4pd4I1 I:2-58 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e4pd4J1 J:1-127 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pd4K1 K:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4pd4K1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pd4J1 K:x,y,z->J:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4pd4E1 K:x,y,z->E:X,Y,Z ISP domain Interaction Interface Pymol