Domain ID e4pddA2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: DctP
UID: 001523504
Type: Automatic domain
Parent: e3gyyA1
Range: A:32-152,A:243-334
Ligands: EAX FMT MLA
PDB: 4pdd
PDB Description: TRAP dicarboxylate transporter, DctP subunit
UniProt: Q12HD7
Species: Polaromonas sp. JS666

Structure of domain e4pddA2

Structural contacts of domain e4pddA2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pddB2 A:-X+1,Y,-Z+1->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4pddB2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4pddB1 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4pddC2 A:X,Y,Z->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4pddC1 A:x,y,z->C:X-1/2,Y-1/2,Z-1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4pddC2 A:x,y,z->C:X-1/2,Y-1/2,Z-1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4pddB2 A:-X,Y,-Z+1->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4pddC2 A:x,y,z->C:-X+1/2,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol