Domain ID e4pecY1

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  • A: alpha bundles
  • X: Long alpha-hairpin
  • H: Ribosomal protein L29 (L29p)
  • T: Ribosomal protein L29 (L29p)
  • F: Ribosomal_L29
UID: 001317053
Type: Automatic domain
Parent: e1vqoV1
Range: Y:1-63
PDB: 4pec
PDB Description:
Species:

Structure of domain e4pecY1

Domains in the same chain:

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e4pecY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)

Domains in the same PDB:

e4pec01 0:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pec21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4pec31 3:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4pec41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4pecC1 C:2-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pecC2 C:126-272 SH3 SH3 SH3
e4pecE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4pecF1 F:2-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4pecG1 G:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4pecG2 G:83-177 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4pecH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4pecI1 I:2-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4pecI2 I:73-142 HTH HTH Ribosomal protein L11, C-terminal domain
e4pecJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4pecK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4pecN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4pecO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4pecR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4pecS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4pecT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4pecU1 U:2-103 SH3 SH3 SH3
e4pecV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4pecW1 W:11-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4pecX1 X:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4pecY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4pecZ1 Z:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e4pecY1 of H-group "Ribosomal protein L29 (L29p)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pecT1 Y:x,y,z->T:X,Y,Z Ribosomal proteins S24e, L23 and L15e Interaction Interface Pymol