ECOD: domain e4phcA1

Domain ID e4phcA1

A: a/b three-layered sandwiches
X: Anticodon-binding domain of Class II aaRS
H: Anticodon-binding domain of Class II aaRS
T: Anticodon-binding domain of Class II aaRS
F: HGTP_anticodon

UID:	001346581
Type:	Automatic domain
Parent:	e1kmmA2
Range:	A:382-504
Ligands:	GOL HIS
PDB:	4phc
PDB Description:	Histidine--tRNA ligase, cytoplasmic
UniProt:	P12081
Hsap BLAST neighbor:	P12081
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4phcA2	A:53-381	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4phcA1	A:382-504	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Domains in the same PDB:

e4phcA2	A:53-381	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4phcA1	A:382-504	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4phcB2	B:53-381	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4phcB1	B:382-504	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4phcC2	C:53-381	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4phcC1	C:382-504	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e4phcD2	D:53-381	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e4phcD1	D:382-504	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Structural contacts of domain e4phcA1 of H-group "Anticodon-binding domain of Class II aaRS":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4phcB2	A:X,Y,Z->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e4phcC1	A:-X-1,Y-1/2,-Z-1/2->C:x,y,z	Anticodon-binding domain of Class II aaRS	Interaction Interface Pymol
e4phcD2	A:-X,Y-1/2,-Z-1/2->D:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e4phcB2	A:-X,Y-1/2,-Z-1/2->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol