Domain ID e4pirD2

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  • A: alpha bundles
  • X: Neurotransmitter-gated ion-channel transmembrane pore
  • H: Neurotransmitter-gated ion-channel transmembrane pore
  • T: Neurotransmitter-gated ion-channel transmembrane pore
  • F: Neur_chan_memb
UID: 001320077
Type: Automatic domain
Parent: e1oedA1
Range: D:206-332,D:409-459
Ligands: NAG
PDB: 4pir
PDB Description: 5-hydroxytryptamine receptor 3A
UniProt: P23979
Hsap BLAST neighbor: P46098
Species: Mus musculus

Structure of domain e4pirD2

Domains in the same chain:

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e4pirD1 D:8-205 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4pirD2 D:206-332,D:409-459 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Domains in the same PDB:

e4pirA1 A:8-205 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4pirA2 A:206-332,A:409-458 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4pirB1 B:8-205 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4pirB2 B:206-332,B:409-458 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4pirC1 C:8-205 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4pirC2 C:206-332,C:409-459 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4pirD1 D:8-205 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4pirD2 D:206-332,D:409-459 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4pirE1 E:8-205 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4pirE2 E:206-332,E:409-458 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4pirF1 F:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pirG1 G:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pirH1 H:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pirI1 I:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pirJ1 J:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4pirD2 of H-group "Neurotransmitter-gated ion-channel transmembrane pore":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pirC2 D:x,y,z->C:X,Y,Z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e4pirE2 D:X,Y,Z->E:x,y,z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e4pirI1 D:X,Y,Z->I:x,y,z Immunoglobulin-related Interaction Interface Pymol