Domain ID e4pjaA1

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_I
UID: 001299947
Type: Automatic domain
Parent: e1kcgC1
Range: A:0-178
Ligands: 2LJ
PDB: 4pja
PDB Description: Major histocompatibility complex class I-related gene protein
UniProt: Q95460
Hsap BLAST neighbor: Q95460
Species: Homo sapiens

Structure of domain e4pjaA1

Domains in the same chain:

e4pjaA1 A:0-178 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4pjaA2 A:179-269 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4pjaA1 A:0-178 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4pjaA2 A:179-269 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaB1 B:1-96 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaC1 C:0-178 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4pjaC2 C:179-269 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaD1 D:1-96 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaE2 E:2-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaE1 E:109-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaF2 F:3-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaF1 F:118-237 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaG2 G:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaG1 G:109-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaH1 H:3-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjaH2 H:118-240 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4pjaA1 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pjaB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4pjaH2 A:-X+1/2,Y-1/2,-Z+3->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4pjaE2 A:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4pjaF2 A:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4pjaF1 A:x,y,z->F:-X+1/2,Y-1/2,-Z+2 Immunoglobulin-related Interaction Interface Pymol
e4pjaG1 A:-X+1/2,Y-1/2,-Z+3->G:x,y,z Immunoglobulin-related Interaction Interface Pymol