Domain ID e4pjdB1

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 001299993
Type: Automatic domain
Parent: e1k5nB1
Range: B:1-96
PDB: 4pjd
PDB Description: Beta-2-microglobulin
UniProt: P61769
Hsap BLAST neighbor: P61769
Species: Homo sapiens

Structure of domain e4pjdB1

Domains in the same chain:

e4pjdB1 B:1-96 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4pjdA1 A:0-178 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4pjdA2 A:179-269 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdB1 B:1-96 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdC1 C:0-178 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4pjdC2 C:179-269 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdD1 D:1-96 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdE2 E:2-115 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdE1 E:116-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdF2 F:3-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdF1 F:118-237 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdG2 G:2-115 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdG1 G:116-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdH2 H:3-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4pjdH1 H:118-241 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4pjdB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pjdA2 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4pjdA1 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e4pjdC1 B:x,y,z->C:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e4pjdG2 B:X,Y-1,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4pjdG1 B:-X+1/2,Y-1/2,-Z+3->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4pjdD1 B:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol