Domain ID e4pknF1

Download files:
  • A: alpha bundles
  • X: GroEL equatorial domain-like
  • H: GroEL equatorial domain-like
  • T: GroEL equatorial domain-like
  • F: Cpn60_TCP1
UID: 001323567
Type: Automatic domain
Parent: e1kp8A1
Range: F:2-136,F:410-525
Ligands: ADP BEF K MG
PDB: 4pkn
PDB Description: 60 kDa chaperonin
UniProt: Q548M1
Hsap BLAST neighbor: P10809
Species: Escherichia coli

Structure of domain e4pknF1

Domains in the same chain:

Download Pymol

e4pknF1 F:2-136,F:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknF3 F:137-190,F:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknF2 F:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e4pkn11 1:1-97 GroES-like GroES-related GroES
e4pkn21 2:1-97 GroES-like GroES-related GroES
e4pknA1 A:2-136,A:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknA3 A:137-190,A:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknA2 A:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknB1 B:2-136,B:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknB3 B:137-190,B:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknB2 B:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknC1 C:2-136,C:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknC3 C:137-190,C:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknC2 C:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknD1 D:2-136,D:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknD3 D:137-190,D:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknD2 D:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknE1 E:2-136,E:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknE3 E:137-190,E:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknE2 E:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknF1 F:2-136,F:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknF3 F:137-190,F:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknF2 F:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknG1 G:2-136,G:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknG3 G:137-190,G:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknG2 G:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknH1 H:2-136,H:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknH3 H:137-190,H:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknH2 H:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknI1 I:2-136,I:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknI3 I:137-190,I:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknI2 I:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknJ1 J:2-136,J:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknJ3 J:137-190,J:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknJ2 J:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknK1 K:2-136,K:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknK3 K:137-190,K:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknK2 K:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknL1 L:2-136,L:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknL3 L:137-190,L:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknL2 L:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknM1 M:2-136,M:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknM3 M:137-190,M:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknM2 M:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknN1 N:2-136,N:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pknN3 N:137-190,N:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pknN2 N:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pknO1 O:1-97 GroES-like GroES-related GroES
e4pknP1 P:1-97 GroES-like GroES-related GroES
e4pknQ1 Q:1-97 GroES-like GroES-related GroES
e4pknR1 R:1-97 GroES-like GroES-related GroES
e4pknS1 S:1-97 GroES-like GroES-related GroES
e4pknT1 T:1-97 GroES-like GroES-related GroES
e4pknU1 U:1-97 GroES-like GroES-related GroES
e4pknV1 V:1-96 GroES-like GroES-related GroES
e4pknW1 W:2-97 GroES-like GroES-related GroES
e4pknX1 X:2-96 GroES-like GroES-related GroES
e4pknY1 Y:1-96 GroES-like GroES-related GroES
e4pknZ1 Z:1-97 GroES-like GroES-related GroES

Structural contacts of domain e4pknF1 of H-group "GroEL equatorial domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pknE1 F:x,y,z->E:X,Y,Z GroEL equatorial domain-like Interaction Interface Pymol
e4pknG3 F:X,Y,Z->G:x,y,z GroEL-intermediate domain like Interaction Interface Pymol
e4pknG1 F:X,Y,Z->G:x,y,z GroEL equatorial domain-like Interaction Interface Pymol
e4pknA2 F:-X,Y-1/2,-Z+5/2->A:x,y,z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e4pknM1 F:X,Y,Z->M:x,y,z GroEL equatorial domain-like Interaction Interface Pymol