Domain ID e4pkoM1

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  • A: alpha bundles
  • X: GroEL equatorial domain-like
  • H: GroEL equatorial domain-like
  • T: GroEL equatorial domain-like
  • F: Cpn60_TCP1
UID: 001323650
Type: Automatic domain
Parent: e1kp8A1
Range: M:2-136,M:410-525
Ligands: ADP BEF K MG
PDB: 4pko
PDB Description: 60 kDa chaperonin
UniProt: Q548M1
Hsap BLAST neighbor: P10809
Species: Escherichia coli

Structure of domain e4pkoM1

Domains in the same chain:

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e4pkoM1 M:2-136,M:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoM3 M:137-190,M:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoM2 M:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e4pko11 1:1-97 GroES-like GroES-related GroES
e4pko21 2:1-97 GroES-like GroES-related GroES
e4pkoA1 A:2-136,A:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoA3 A:137-190,A:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoA2 A:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoB1 B:2-136,B:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoB3 B:137-190,B:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoB2 B:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoC1 C:2-136,C:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoC3 C:137-190,C:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoC2 C:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoD1 D:2-136,D:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoD3 D:137-190,D:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoD2 D:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoE1 E:2-136,E:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoE3 E:137-190,E:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoE2 E:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoF1 F:2-136,F:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoF3 F:137-190,F:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoF2 F:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoG1 G:2-136,G:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoG3 G:137-190,G:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoG2 G:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoH1 H:2-136,H:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoH3 H:137-190,H:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoH2 H:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoI1 I:2-136,I:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoI3 I:137-190,I:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoI2 I:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoJ1 J:2-136,J:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoJ3 J:137-190,J:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoJ2 J:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoK1 K:2-136,K:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoK3 K:137-190,K:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoK2 K:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoL1 L:2-136,L:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoL3 L:137-190,L:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoL2 L:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoM1 M:2-136,M:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoM3 M:137-190,M:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoM2 M:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoN1 N:2-136,N:410-525 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4pkoN3 N:137-190,N:367-409 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4pkoN2 N:191-366 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4pkoO1 O:3-97 GroES-like GroES-related GroES
e4pkoP1 P:1-97 GroES-like GroES-related GroES
e4pkoQ1 Q:2-97 GroES-like GroES-related GroES
e4pkoR1 R:1-97 GroES-like GroES-related GroES
e4pkoS1 S:2-97 GroES-like GroES-related GroES
e4pkoT1 T:1-97 GroES-like GroES-related GroES
e4pkoU1 U:1-97 GroES-like GroES-related GroES
e4pkoV1 V:1-97 GroES-like GroES-related GroES
e4pkoW1 W:1-97 GroES-like GroES-related GroES
e4pkoX1 X:1-97 GroES-like GroES-related GroES
e4pkoY1 Y:1-96 GroES-like GroES-related GroES
e4pkoZ1 Z:1-95 GroES-like GroES-related GroES

Structural contacts of domain e4pkoM1 of H-group "GroEL equatorial domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pkoL1 M:x,y,z->L:X,Y,Z GroEL equatorial domain-like Interaction Interface Pymol
e4pkoN3 M:X,Y,Z->N:x,y,z GroEL-intermediate domain like Interaction Interface Pymol
e4pkoN1 M:X,Y,Z->N:x,y,z GroEL equatorial domain-like Interaction Interface Pymol
e4pkoD2 M:x,y,z->D:X-1/2,-Y+1/2,-Z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e4pkoC1 M:x,y,z->C:X,Y,Z GroEL equatorial domain-like Interaction Interface Pymol
e4pkoR1 M:x,y,z->R:X-1/2,-Y+1/2,-Z GroES-related Interaction Interface Pymol