Domain ID e4plyD1

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: Ldh_1_N
UID: 001300128
Type: Automatic domain
Parent: e2cmdA2
Range: D:3-145
Ligands: NAI PYR
PDB: 4ply
PDB Description: malate dehydrogenase
UniProt: A0A075B5H0
Hsap BLAST neighbor: Q6ZMR3
Species:

Structure of domain e4plyD1

Domains in the same chain:

Download Pymol

e4plyD1 D:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyD2 D:152-320 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like

Domains in the same PDB:

e4plyA1 A:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyA2 A:152-320 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e4plyB1 B:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyB2 B:152-320 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e4plyC1 C:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyC2 C:152-321 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e4plyD1 D:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyD2 D:152-320 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e4plyE1 E:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyE2 E:152-320 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e4plyF1 F:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyF2 F:152-320 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e4plyG1 G:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyG2 G:152-321 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e4plyH1 H:3-145 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4plyH2 H:152-320 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like

Structural contacts of domain e4plyD1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4plyA2 D:x,y,z->A:X,Y,Z LDH C-terminal domain-like Interaction Interface Pymol
e4plyA1 D:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e4plyB2 D:x,y,z->B:X,Y,Z LDH C-terminal domain-like Interaction Interface Pymol
e4plyA1 D:X-1,Y,Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e4plyC1 D:X-1,Y,Z->C:x,y,z Rossmann-related Interaction Interface Pymol
e4plyC2 D:X-1,Y,Z->C:x,y,z LDH C-terminal domain-like Interaction Interface Pymol