ECOD: domain e4pmwA2

Domain ID e4pmwA2

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: Rrp44_CSD1

UID:	001317082
Type:	Automatic domain
Parent:	e2vnuD3
Range:	A:49-118,A:229-241
PDB:	4pmw
PDB Description:	DIS3-like exonuclease 2
UniProt:	Q8CI75
Hsap BLAST neighbor:	Q8IYB7
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e4pmwA2

Domains in the same chain:

Download Pymol

e4pmwA2	A:49-118,A:229-241	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4pmwA3	A:242-343	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4pmwA1	A:344-759	OB-fold	RNB domain-like	RNB domain-like
e4pmwA4	A:760-856	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e4pmwA2	A:49-118,A:229-241	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4pmwA3	A:242-343	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4pmwA1	A:344-759	OB-fold	RNB domain-like	RNB domain-like
e4pmwA4	A:760-856	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4pmwB4	B:49-118,B:229-241	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4pmwB2	B:242-336	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4pmwB1	B:337-752	OB-fold	RNB domain-like	RNB domain-like
e4pmwB3	B:753-856	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e4pmwA2 of H-group "Nucleic acid-binding proteins":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4pmwA4	A:X-1,Y,Z->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e4pmwA1	A:X-1,Y,Z->A:x,y,z	RNB domain-like	Interaction Interface Pymol