Domain ID e4pogB1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: MCM_OB
UID: 001290471
Type: Automatic domain
Parent: e1ltlA1
Range: B:95-130,B:181-254
PDB: 4pog
PDB Description: Cell division control protein 21
UniProt: Q8U3I4
Hsap BLAST neighbor: P49736
Species:

Structure of domain e4pogB1

Domains in the same chain:

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e4pogB3 B:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogB1 B:95-130,B:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogB2 B:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e4pogA3 A:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogA1 A:95-130,A:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogA2 A:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogB3 B:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogB1 B:95-130,B:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogB2 B:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogC3 C:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogC1 C:95-130,C:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogC2 C:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogD3 D:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogD1 D:95-130,D:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogD2 D:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogE3 E:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogE1 E:95-130,E:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogE2 E:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogF3 F:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogF1 F:95-130,F:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogF2 F:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogG3 G:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogG1 G:95-130,G:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogG2 G:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogH3 H:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogH1 H:95-130,H:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogH2 H:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogI3 I:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogI1 I:95-130,I:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogI2 I:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogJ3 J:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogJ1 J:95-130,J:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogJ2 J:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogK3 K:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogK1 K:95-130,K:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogK2 K:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4pogL3 L:0-94 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54) N-terminal subdomain in DNA replication initiator (cdc21/cdc54)
e4pogL1 L:95-130,L:181-254 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pogL2 L:131-180 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e4pogB1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pogA1 B:x,y,z->A:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol
e4pogC1 B:X,Y,Z->C:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e4pogC2 B:X,Y,Z->C:x,y,z Rubredoxin-related Interaction Interface Pymol
e4pogJ2 B:x,y,z->J:-X,Y-1/2,-Z+1 Rubredoxin-related Interaction Interface Pymol
e4pogI3 B:x,y,z->I:-X,Y-1/2,-Z+1 N-terminal subdomain in DNA replication initiator (cdc21/cdc54) Interaction Interface Pymol