ECOD: domain e4psnB2

Domain ID e4psnB2

A: a+b two layers
X: Ribosomal protein L11/L12e N-terminal domain-like
H: ssDNA-binding protein ThermoDBP-related
T: ssDNA-binding protein ThermoDBP-related
F: ThermoDBP-RP_arch

UID:	001296463
Type:	Automatic domain
Parent:	e4psnC1
Range:	B:0-113
Ligands:	IMD
PDB:	4psn
PDB Description:	ssDNA binding protein
UniProt:	Q9YAS7
Species:

Domains in the same chain:

Download Pymol

e4psnB2	B:0-113	Ribosomal protein L11/L12e N-terminal domain-like	ssDNA-binding protein ThermoDBP-related	ssDNA-binding protein ThermoDBP-related
e4psnB1	B:114-218	UBC-like	Thermo-DBP-RP2 C-terminal domain	Thermo-DBP-RP2 C-terminal domain

Domains in the same PDB:

e4psnA2	A:0-113	Ribosomal protein L11/L12e N-terminal domain-like	ssDNA-binding protein ThermoDBP-related	ssDNA-binding protein ThermoDBP-related
e4psnA1	A:114-219	UBC-like	Thermo-DBP-RP2 C-terminal domain	Thermo-DBP-RP2 C-terminal domain
e4psnB2	B:0-113	Ribosomal protein L11/L12e N-terminal domain-like	ssDNA-binding protein ThermoDBP-related	ssDNA-binding protein ThermoDBP-related
e4psnB1	B:114-218	UBC-like	Thermo-DBP-RP2 C-terminal domain	Thermo-DBP-RP2 C-terminal domain
e4psnC1	C:1-113	Ribosomal protein L11/L12e N-terminal domain-like	ssDNA-binding protein ThermoDBP-related	ssDNA-binding protein ThermoDBP-related
e4psnC2	C:114-218	UBC-like	Thermo-DBP-RP2 C-terminal domain	Thermo-DBP-RP2 C-terminal domain
e4psnD2	D:-2-113	Ribosomal protein L11/L12e N-terminal domain-like	ssDNA-binding protein ThermoDBP-related	ssDNA-binding protein ThermoDBP-related
e4psnD1	D:114-218	UBC-like	Thermo-DBP-RP2 C-terminal domain	Thermo-DBP-RP2 C-terminal domain

Structural contacts of domain e4psnB2 of H-group "ssDNA-binding protein ThermoDBP-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4psnC1	B:X,Y,Z->C:x,y,z	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol
e4psnC2	B:X,Y,Z->C:x,y,z	Thermo-DBP-RP2 C-terminal domain	Interaction Interface Pymol
e4psnA1	B:x,y,z->A:X,Y,Z	Thermo-DBP-RP2 C-terminal domain	Interaction Interface Pymol
e4psnA2	B:x,y,z->A:X,Y,Z	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol
e4psnD2	B:X,Y,Z->D:x,y,z	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol
e4psnA1	B:x,y,z->A:X-1,Y,Z	Thermo-DBP-RP2 C-terminal domain	Interaction Interface Pymol
e4psnA2	B:x,y,z->A:-X,Y-1/2,-Z+1/2	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol
e4psnC2	B:x,y,z->C:X-1/2,-Y-1/2,-Z	Thermo-DBP-RP2 C-terminal domain	Interaction Interface Pymol
e4psnD2	B:x,y,z->D:X-1,Y,Z	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol
e4psnB2	B:x,y,z->B:-X-1,Y-1/2,-Z+1/2	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol
e4psnB2	B:-X-1,Y-1/2,-Z+1/2->B:x,y,z	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol
e4psnA2	B:-X-1,Y-1/2,-Z+1/2->A:x,y,z	ssDNA-binding protein ThermoDBP-related	Interaction Interface Pymol