Domain ID e4psoD1

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  • A: a+b two layers
  • X: UBC-like
  • H: Thermo-DBP-RP2 C-terminal domain
  • T: Thermo-DBP-RP2 C-terminal domain
  • F: Thermo-DBP
UID: 001296472
Type: Automatic domain
Parent: e4psnC2
Range: D:114-217
PDB: 4pso
PDB Description: SSDNA BINDING PROTEIN
UniProt: Q9YAS7
Species:

Structure of domain e4psoD1

Domains in the same chain:

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e4psoD2 D:-1-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoD1 D:114-217 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain

Domains in the same PDB:

e4psoA2 A:0-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoA1 A:114-217 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain
e4psoB2 B:-1-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoB1 B:114-218 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain
e4psoC2 C:-1-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoC1 C:114-218 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain
e4psoD2 D:-1-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoD1 D:114-217 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain
e4psoF2 F:0-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoF1 F:114-218 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain
e4psoG2 G:0-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoG1 G:114-217 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain
e4psoH2 H:-1-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoH1 H:114-218 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain
e4psoI2 I:-2-113 Ribosomal protein L11/L12e N-terminal domain-like ssDNA-binding protein ThermoDBP-related ssDNA-binding protein ThermoDBP-related
e4psoI1 I:114-218 UBC-like Thermo-DBP-RP2 C-terminal domain Thermo-DBP-RP2 C-terminal domain

Structural contacts of domain e4psoD1 of H-group "Thermo-DBP-RP2 C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4psoA2 D:x,y,z->A:X,Y,Z ssDNA-binding protein ThermoDBP-related Interaction Interface Pymol
e4psoB1 D:x,y,z->B:X,Y,Z Thermo-DBP-RP2 C-terminal domain Interaction Interface Pymol
e4psoC2 D:x,y,z->C:X,Y,Z ssDNA-binding protein ThermoDBP-related Interaction Interface Pymol
e4psoA2 D:X-1/2,-Y+1/2,-Z+1->A:x,y,z ssDNA-binding protein ThermoDBP-related Interaction Interface Pymol
e4psoA1 D:X-1/2,-Y+1/2,-Z+1->A:x,y,z Thermo-DBP-RP2 C-terminal domain Interaction Interface Pymol
e4psoF1 D:-X+3,Y-1/2,-Z+1/2->F:x,y,z Thermo-DBP-RP2 C-terminal domain Interaction Interface Pymol
e4psoF2 D:-X+3,Y-1/2,-Z+1/2->F:x,y,z ssDNA-binding protein ThermoDBP-related Interaction Interface Pymol
e4psoI2 D:-X+3,Y-1/2,-Z+1/2->I:x,y,z ssDNA-binding protein ThermoDBP-related Interaction Interface Pymol
e4psoD2 D:X-1/2,-Y+1/2,-Z+1->D:x,y,z ssDNA-binding protein ThermoDBP-related Interaction Interface Pymol