Domain ID e4puoB1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RVT_1
UID: 001297347
Type: Automatic domain
Parent: e1ztwA1
Range: B:4-241
PDB: 4puo
PDB Description: HIV-1 REVERSE TRANSCRIPTASE, P51 SUBUNIT
UniProt: P03366
Hsap BLAST neighbor: P63135
Species:

Structure of domain e4puoB1

Domains in the same chain:

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e4puoB1 B:4-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4puoB2 B:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4puoB3 B:316-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e4puoA4 A:0-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4puoA3 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4puoA1 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e4puoA2 A:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4puoB1 B:4-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4puoB2 B:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4puoB3 B:316-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e4puoC4 C:0-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4puoC3 C:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4puoC1 C:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e4puoC2 C:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4puoD1 D:4-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4puoD2 D:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4puoD3 D:316-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e4puoB1 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4puoA4 B:x,y,z->A:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4puoA1 B:x,y,z->A:X,Y,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e4puoD2 B:-X+1,Y-1/2,-Z+1->D:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4puoA3 B:x,y,z->A:-X+1,Y-1/2,-Z+1 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol