ECOD: domain e4pzlB1

Domain ID e4pzlB1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: ADK

UID:	001397164
Type:	Automatic domain
Parent:	e1qf9A1
Range:	B:-9-121,B:157-218
Ligands:	CA FMT GOL
PDB:	4pzl
PDB Description:	ADENYLATE KINASE
UniProt:	Q5NFR4
Hsap BLAST neighbor:	P54819
Species:

Domains in the same chain:

Download Pymol

e4pzlB1	B:-9-121,B:157-218	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4pzlB2	B:122-156	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e4pzlA1	A:-9-121,A:157-217	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4pzlA2	A:122-156	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4pzlB1	B:-9-121,B:157-218	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4pzlB2	B:122-156	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4pzlC1	C:-1-121,C:157-217	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4pzlC2	C:122-156	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4pzlD1	D:0-121,D:157-217	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4pzlD2	D:122-156	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e4pzlB1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4pzlA2	B:x,y,z->A:X,Y,Z	Rubredoxin-related	Interaction Interface Pymol
e4pzlA1	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e4pzlD1	B:X,Y,Z->D:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4pzlD2	B:X,Y,Z->D:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e4pzlC2	B:X-1,Y-1,Z->C:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e4pzlC1	B:X,Y,Z->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4pzlD1	B:X-1,Y-1,Z->D:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4pzlA1	B:X-1,Y,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4pzlC1	B:x,y,z->C:-Y+2,X-Y,Z-1/3	P-loop domains-related	Interaction Interface Pymol
e4pzlC1	B:x,y,z->C:-Y+1,X-Y-1,Z-1/3	P-loop domains-related	Interaction Interface Pymol