ECOD: domain e4q35A2

Domain ID e4q35A2

A: beta barrels
X: Outer membrane meander beta-barrels
H: LPS-assembly protein LptD
T: LPS-assembly protein LptD
F: LptD

UID:	001313005
Type:	Manual and representative domain
Range:	A:226-784
Ligands:	C8E LDA SO4
PDB:	4q35
PDB Description:	LPS-assembly protein LptD
UniProt:	Q83SQ0
Species:	Shigella flexneri

Domains in the same chain:

Download Pymol

e4q35A1	A:25-225	Periplasmic lipopolysaccharide transport protein LptA (YhbN)	Periplasmic lipopolysaccharide transport protein LptA (YhbN)	Periplasmic lipopolysaccharide transport protein LptA (YhbN)
e4q35A2	A:226-784	Outer membrane meander beta-barrels	LPS-assembly protein LptD	LPS-assembly protein LptD

Domains in the same PDB:

e4q35A1	A:25-225	Periplasmic lipopolysaccharide transport protein LptA (YhbN)	Periplasmic lipopolysaccharide transport protein LptA (YhbN)	Periplasmic lipopolysaccharide transport protein LptA (YhbN)
e4q35A2	A:226-784	Outer membrane meander beta-barrels	LPS-assembly protein LptD	LPS-assembly protein LptD
e4q35B1	B:1000-1149	TolB, N-terminal domain	TolB, N-terminal domain	TolB, N-terminal domain

Structural contacts of domain e4q35A2 of H-group "LPS-assembly protein LptD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4q35B1	A:X,Y,Z->B:x,y,z	TolB, N-terminal domain	Interaction Interface Pymol
e4q35A2	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	LPS-assembly protein LptD	Interaction Interface Pymol
e4q35A2	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	LPS-assembly protein LptD	Interaction Interface Pymol
e4q35A1	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	Periplasmic lipopolysaccharide transport protein LptA (YhbN)	Interaction Interface Pymol
e4q35A2	A:x,y,z->A:-X+1/2,Y-1/2,-Z	LPS-assembly protein LptD	Interaction Interface Pymol
e4q35A2	A:-X+1/2,Y-1/2,-Z->A:x,y,z	LPS-assembly protein LptD	Interaction Interface Pymol
e4q35A1	A:-X+1/2,Y-1/2,-Z->A:x,y,z	Periplasmic lipopolysaccharide transport protein LptA (YhbN)	Interaction Interface Pymol