Domain ID e4q7jD2

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: S1
UID: 001346629
Type: Automatic domain
Parent: e1y14B1
Range: D:3-89
PDB: 4q7j
PDB Description: 30S ribosomal protein S1
UniProt: P0AG67
Species:

Structure of domain e4q7jD2

Domains in the same chain:

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e4q7jD2 D:3-89 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4q7jD1 D:87-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4q7jA2 A:4-54 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 RuvA-C, UBA, CRAL/TRIO-N, HBS1
e4q7jA1 A:55-139 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e4q7jA3 A:140-281 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e4q7jB2 B:8-40,B:65-202 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4q7jB1 B:203-298 cradle loop barrel RIFT-related Alanine racemase-C
e4q7jB3 B:299-393 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4q7jC2 C:8-379 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4q7jC1 C:380-569 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4q7jD2 D:3-89 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4q7jD1 D:87-179 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4q7jE2 E:3-54 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 RuvA-C, UBA, CRAL/TRIO-N, HBS1
e4q7jE1 E:55-139 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e4q7jE3 E:140-282 T-fold Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain
e4q7jF2 F:7-40,F:64-202 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4q7jF1 F:203-298 cradle loop barrel RIFT-related Alanine racemase-C
e4q7jF3 F:299-393 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4q7jG2 G:8-379 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4q7jG1 G:380-569 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4q7jH2 H:2-89 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4q7jH1 H:87-178 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Structural contacts of domain e4q7jD2 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4q7jC2 D:x,y,z->C:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4q7jC1 D:x,y,z->C:X,Y,Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4q7jH2 D:x,y,z->H:X-1,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol
e4q7jG2 D:x,y,z->G:X-1,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4q7jB1 D:x,y,z->B:X,Y,Z RIFT-related Interaction Interface Pymol
e4q7jH1 D:x,y,z->H:X-1/2,-Y-1/2,-Z+1 Nucleic acid-binding proteins Interaction Interface Pymol