| UID: | 001297470 |
|---|---|
| Type: | Automatic domain |
| Parent: | e5hz0B1 |
| Range: | A:1-406 |
| Ligands: | NAG SO4 |
| PDB: | 4qdh |
| PDB Description: | Variable lymphocyte receptor B, Toll-like receptor 9 chimera |
| UniProt: | Q4G1L2 |
| Hsap BLAST neighbor: | Q9NR96 |
| Species: | Mus musculus |
Structure of domain e4qdhA1
Domains in the same chain:
| e4qdhA1 | A:1-406 | Single-stranded right-handed beta-helix | Leucine-rich repeats | Leucine-rich repeats |
Domains in the same PDB:
| e4qdhA1 | A:1-406 | Single-stranded right-handed beta-helix | Leucine-rich repeats | Leucine-rich repeats |
| e4qdhB1 | B:1-406 | Single-stranded right-handed beta-helix | Leucine-rich repeats | Leucine-rich repeats |
Structural contacts of domain e4qdhA1 of H-group "Leucine-rich repeats":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4qdhB1 | A:X,Y,Z->B:x,y,z | Leucine-rich repeats | Interaction Interface Pymol |
| e4qdhB1 | A:x,y,z->B:-Y,X-Y-1,Z+1/3 | Leucine-rich repeats | Interaction Interface Pymol |
| e4qdhA1 | A:x,y,z->A:Y,X-1,-Z | Leucine-rich repeats | Interaction Interface Pymol |
| e4qdhA1 | A:Y,X-1,-Z->A:x,y,z | Leucine-rich repeats | Interaction Interface Pymol |
| e4qdhB1 | A:-X+1,-X+Y,-Z+1/3->B:x,y,z | Leucine-rich repeats | Interaction Interface Pymol |
| e4qdhB1 | A:Y,X-1,-Z->B:x,y,z | Leucine-rich repeats | Interaction Interface Pymol |
