| UID: | 001294010 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3godA1 |
| Range: | D:4-282 |
| PDB: | 4qdl |
| PDB Description: | CRISPR-associated endonuclease Cas1 |
| UniProt: | Q46896 |
| Species: |
Structure of domain e4qdlD1
Domains in the same chain:
| e4qdlD1 | D:4-282 | Cas1 | Cas1 | Cas1 |
Domains in the same PDB:
| e4qdlA1 | A:13-280 | Cas1 | Cas1 | Cas1 |
| e4qdlB1 | B:4-283 | Cas1 | Cas1 | Cas1 |
| e4qdlC1 | C:14-280 | Cas1 | Cas1 | Cas1 |
| e4qdlD1 | D:4-282 | Cas1 | Cas1 | Cas1 |
| e4qdlE1 | E:2-94 | Alpha-beta plaits | CRISPR associated protein Cas2-like | CRISPR associated protein Cas2-like |
| e4qdlF1 | F:2-95 | Alpha-beta plaits | CRISPR associated protein Cas2-like | CRISPR associated protein Cas2-like |
Structural contacts of domain e4qdlD1 of H-group "Cas1":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4qdlC1 | D:x,y,z->C:X,Y,Z | Cas1 | Interaction Interface Pymol |
| e4qdlE1 | D:X,Y,Z->E:x,y,z | CRISPR associated protein Cas2-like | Interaction Interface Pymol |
| e4qdlF1 | D:X,Y,Z->F:x,y,z | CRISPR associated protein Cas2-like | Interaction Interface Pymol |
| e4qdlB1 | D:x,y,z->B:-X+1,Y-1/2,-Z+2 | Cas1 | Interaction Interface Pymol |
| e4qdlC1 | D:-X,Y-1/2,-Z+1->C:x,y,z | Cas1 | Interaction Interface Pymol |
