Domain ID e4qhbB1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: N-glycanase_C
UID: 001297525
Type: Automatic domain
Parent: e1pgsA2
Range: B:113-142,B:237-332,B:359-416
Ligands: PEG
PDB: 4qhb
PDB Description: Uncharacterized protein
UniProt: A6L3Z9
Species:

Structure of domain e4qhbB1

Domains in the same chain:

e4qhbB2 B:27-112,B:143-236,B:333-358 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbB1 B:113-142,B:237-332,B:359-416 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

e4qhbA2 A:27-112,A:143-236,A:333-358 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbA1 A:113-142,A:237-332,A:359-416 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbB2 B:27-112,B:143-236,B:333-358 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbB1 B:113-142,B:237-332,B:359-416 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbC2 C:27-112,C:143-236,C:333-358 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbC1 C:113-142,C:237-332,C:359-416 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbD2 D:27-112,D:143-236,D:333-358 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4qhbD1 D:113-142,D:237-332,D:359-416 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)

Structural contacts of domain e4qhbB1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qhbA2 B:x,y,z->A:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4qhbA1 B:x,y,z->A:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4qhbC2 B:X-1,Y,Z->C:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4qhbA1 B:x,y,z->A:-X+2,Y-1/2,-Z+1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4qhbA2 B:x,y,z->A:-X+2,Y-1/2,-Z+1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4qhbD2 B:X-1,Y,Z-1->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol