Domain ID e4qoyB3

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: Transketolase_N
UID: 001397349
Type: Automatic domain
Parent: e2r8oA3
Range: B:5-470
PDB: 4qoy
PDB Description: Pyruvate dehydrogenase E1 component
UniProt: C6UVU8
Hsap BLAST neighbor: P29401
Species:

Structure of domain e4qoyB3

Domains in the same chain:

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e4qoyB3 B:5-470 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyB2 B:471-700 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyB1 B:701-886 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Domains in the same PDB:

e4qoyA1 A:5-470 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyA2 A:471-700 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyA3 A:701-886 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e4qoyB3 B:5-470 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyB2 B:471-700 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyB1 B:701-886 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e4qoyC3 C:5-470 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyC2 C:471-700 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyC1 C:701-886 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e4qoyD3 D:7-470 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyD2 D:471-700 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4qoyD1 D:701-886 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e4qoyE1 E:122-167 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
e4qoyF1 F:122-167 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex

Structural contacts of domain e4qoyB3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2r8oA3 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2r8oA3 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2r8oA3 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4qoyD3 B:x,y,z->D:X-1/2,-Y+1/2,-Z+1 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4qoyB2 B:x,y,z->B:-X,-Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4qoyB3 B:x,y,z->B:-X,-Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4qoyB2 B:-X,-Y,Z->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4qoyB3 B:-X,-Y,Z->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4qoyE1 B:X,Y,Z->E:x,y,z Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Interaction Interface Pymol
e4qoyE1 B:x,y,z->A:-X,-Y,Z Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Interaction Interface Pymol
e4qoyE1 B:X,Y,Z-1->A:x,y,z Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Interaction Interface Pymol