Domain ID e4qqwE2

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  • A: alpha complex topology
  • X: PDEase-like
  • H: HD-domain/PDEase-like
  • T: HD-domain/PDEase-like
  • F: Cas3_HD
UID: 001347480
Type: Automatic domain
Parent: e3sk9A1
Range: E:14-259
Ligands: FE
PDB: 4qqw
PDB Description: CRISPR-associated helicase, Cas3 family
UniProt: Q47PJ0
Species:

Structure of domain e4qqwE2

Domains in the same chain:

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e4qqwE2 E:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqwE3 E:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwE1 E:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwE4 E:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain

Domains in the same PDB:

e4qqwA2 A:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqwA3 A:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwA1 A:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwA4 A:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqwC2 C:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqwC3 C:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwC1 C:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwC4 C:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqwE2 E:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqwE3 E:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwE1 E:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwE4 E:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqwG2 G:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqwG3 G:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwG1 G:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqwG4 G:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain

Structural contacts of domain e4qqwE2 of H-group "HD-domain/PDEase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qqwG4 E:X,Y,Z->G:x,y,z Cas3 C-terminal domain Interaction Interface Pymol
e4qqwG1 E:X,Y,Z->G:x,y,z P-loop domains-related Interaction Interface Pymol
e4qqwC4 E:x,y,z->C:X,Y,Z-1 Cas3 C-terminal domain Interaction Interface Pymol
e4qqwA3 E:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4qqwG2 E:X-1,Y,Z->G:x,y,z HD-domain/PDEase-like Interaction Interface Pymol