Domain ID e4qqxE2

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  • A: alpha complex topology
  • X: PDEase-like
  • H: HD-domain/PDEase-like
  • T: HD-domain/PDEase-like
  • F: Cas3_HD
UID: 001347372
Type: Automatic domain
Parent: e3sk9A1
Range: E:14-259
Ligands: FE
PDB: 4qqx
PDB Description: CRISPR-associated helicase, Cas3 family
UniProt: Q47PJ0
Species:

Structure of domain e4qqxE2

Domains in the same chain:

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e4qqxE2 E:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqxE3 E:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxE1 E:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxE4 E:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain

Domains in the same PDB:

e4qqxA1 A:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqxA2 A:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxA3 A:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxA4 A:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqxC2 C:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqxC3 C:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxC1 C:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxC4 C:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqxE2 E:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqxE3 E:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxE1 E:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxE4 E:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqxG2 G:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqxG3 G:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxG1 G:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqxG4 G:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain

Structural contacts of domain e4qqxE2 of H-group "HD-domain/PDEase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qqxG1 E:X,Y,Z->G:x,y,z P-loop domains-related Interaction Interface Pymol
e4qqxG4 E:X,Y,Z->G:x,y,z Cas3 C-terminal domain Interaction Interface Pymol
e4qqxC4 E:x,y,z->C:X,Y,Z-1 Cas3 C-terminal domain Interaction Interface Pymol
e4qqxA2 E:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4qqxG2 E:X-1,Y,Z->G:x,y,z HD-domain/PDEase-like Interaction Interface Pymol