Domain ID e4qqyE1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Cas3-like_C_2
UID: 001347495
Type: Automatic domain
Parent: e5b7iA4
Range: E:547-818
Ligands: ADP
PDB: 4qqy
PDB Description: CRISPR-associated helicase, Cas3 family
UniProt: Q47PJ0
Species:

Structure of domain e4qqyE1

Domains in the same chain:

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e4qqyE2 E:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqyE3 E:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyE1 E:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyE4 E:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain

Domains in the same PDB:

e4qqyA2 A:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqyA3 A:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyA1 A:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyA4 A:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqyC2 C:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqyC3 C:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyC1 C:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyC4 C:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqyE2 E:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqyE3 E:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyE1 E:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyE4 E:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain
e4qqyG2 G:14-259 PDEase-like HD-domain/PDEase-like HD-domain/PDEase-like
e4qqyG3 G:260-546 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyG1 G:547-818 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4qqyG4 G:823-944 Cas3 C-terminal domain Cas3 C-terminal domain Cas3 C-terminal domain

Structural contacts of domain e4qqyE1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qqyG2 E:X,Y,Z->G:x,y,z HD-domain/PDEase-like Interaction Interface Pymol
e4qqyA3 E:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4qqyA1 E:-X-1,Y-1/2,-Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e4qqyC3 E:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol