ECOD: domain e4qwdA2

Domain ID e4qwdA2

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: IMS_HHH

UID:	001346659
Type:	Automatic domain
Parent:	e1jx4A1
Range:	A:171-234
Ligands:	CA
PDB:	4qwd
PDB Description:	DNA polymerase IV
UniProt:	Q97W02
Species:

Domain
In chain context
In PDB context

Structure of domain e4qwdA2

Domains in the same chain:

Download Pymol

e4qwdA1	A:1-20,A:70-170	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e4qwdA3	A:21-69	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e4qwdA2	A:171-234	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4qwdA4	A:235-341	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4qwdA1	A:1-20,A:70-170	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e4qwdA3	A:21-69	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e4qwdA2	A:171-234	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4qwdA4	A:235-341	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4qwdA2 of H-group "SAM/DNA-glycosylase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4qwdA4	A:X-1/2,-Y+1/2,-Z->A:x,y,z	Lesion bypass DNA polymerase (Y-family), little finger domain	Interaction Interface Pymol
e4qwdA3	A:-X-1/2,Y-1/2,-Z-1->A:x,y,z	Hypothetical protein Ta1206-like	Interaction Interface Pymol