ECOD: domain e4r0yB1

Domain ID e4r0yB1

A: alpha bundles
X: GKAP homology domain 1
H: GKAP homology domain 1
T: GKAP homology domain 1
F: GKAP

UID:	001388515
Type:	Manual and representative domain
Range:	B:807-916
PDB:	4r0y
PDB Description:	Maltose-binding periplasmic protein, Disks large-associated protein 1
UniProt:	P97836
Hsap BLAST neighbor:	O14490
Species:	Rattus norvegicus

Domains in the same chain:

Download Pymol

e4r0yB2	B:1-111,B:260-363	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4r0yB3	B:112-259	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4r0yB1	B:807-916	GKAP homology domain 1	GKAP homology domain 1	GKAP homology domain 1

Domains in the same PDB:

e4r0yA3	A:1-111,A:260-363	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4r0yA4	A:112-259	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4r0yA2	A:807-912	GKAP homology domain 1	GKAP homology domain 1	GKAP homology domain 1
e4r0yB2	B:1-111,B:260-363	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4r0yB3	B:112-259	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4r0yB1	B:807-916	GKAP homology domain 1	GKAP homology domain 1	GKAP homology domain 1

Structural contacts of domain e4r0yB1 of H-group "GKAP homology domain 1":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4r0yA2	B:x,y,z->A:X,Y,Z	GKAP homology domain 1	Interaction Interface Pymol
e4r0yB1	B:x,y,z->B:-X+1,-Y,Z	GKAP homology domain 1	Interaction Interface Pymol
e4r0yB1	B:-X+1,-Y,Z->B:x,y,z	GKAP homology domain 1	Interaction Interface Pymol
e4r0yA2	B:x,y,z->A:-X+1,-Y,Z	GKAP homology domain 1	Interaction Interface Pymol
e4r0yA2	B:-X+1,-Y,Z-1->A:x,y,z	GKAP homology domain 1	Interaction Interface Pymol