Domain ID e4r88C1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Amidohydro_3
UID: 001349774
Type: Automatic domain
Parent: e1ra0A2
Range: C:51-360
Ligands: 1LD ACY EDO FE2 GOL
PDB: 4r88
PDB Description: Cytosine deaminase
UniProt: A0A0E1CHI1
Species:

Structure of domain e4r88C1

Domains in the same chain:

e4r88C2 C:1-50,C:361-411 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e4r88C1 C:51-360 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e4r88A2 A:1-50,A:361-411 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e4r88A1 A:51-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e4r88B2 B:1-50,B:361-413 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e4r88B1 B:51-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e4r88C2 C:1-50,C:361-411 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e4r88C1 C:51-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e4r88D1 D:1-50,D:361-412 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e4r88D2 D:51-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e4r88E2 E:1-50,E:361-411 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e4r88E1 E:51-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e4r88F2 F:1-50,F:361-411 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e4r88F1 F:51-360 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e4r88C1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4r88E1 C:X,Y,Z->E:x,y,z TIM barrels Interaction Interface Pymol
e4r88E2 C:X,Y,Z->E:x,y,z Composite domain of metallo-dependent hydrolases Interaction Interface Pymol
e4r88A1 C:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e4r88D2 C:X,Y,Z->D:x,y,z TIM barrels Interaction Interface Pymol