ECOD: domain e4tknB1

Domain ID e4tknB1

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: SNX17-27-31_F1_FERM

UID:	001317212
Type:	Automatic domain
Parent:	e4tknA1
Range:	B:113-205
PDB:	4tkn
PDB Description:	Sorting nexin-17
UniProt:	Q15036
Hsap BLAST neighbor:	Q15036
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4tknB1

Domains in the same chain:

Download Pymol

e4tknB1	B:113-205	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4tknB2	B:206-269	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e4tknB3	B:270-388	PH domain-like	PH domain-like	PH domain-like

Domains in the same PDB:

e4tknA1	A:113-205	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4tknA2	A:206-269	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e4tknA3	A:270-388	PH domain-like	PH domain-like	PH domain-like
e4tknB1	B:113-205	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4tknB2	B:206-269	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e4tknB3	B:270-388	PH domain-like	PH domain-like	PH domain-like
e4tknC1	C:113-205	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4tknC2	C:206-269	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e4tknC3	C:270-388	PH domain-like	PH domain-like	PH domain-like

Structural contacts of domain e4tknB1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4tknB1	B:x,y,z->B:-X+1,Y,-Z+2	Ubiquitin-related	Interaction Interface Pymol
e4tknB1	B:-X+1,Y,-Z+2->B:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e4tknB1	B:x,y,z->B:-X+1,Y,-Z+1	Ubiquitin-related	Interaction Interface Pymol
e4tknB1	B:-X+1,Y,-Z+1->B:x,y,z	Ubiquitin-related	Interaction Interface Pymol