Domain ID e4tlmA5

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Unmapped domains
UID: 001523593
Type: Automatic domain
Parent: e4pe5C5
Range: A:648-746
Ligands: 1AC
PDB: 4tlm
PDB Description: receptor subunit GluN1
UniProt: C0KD18
Hsap BLAST neighbor: Q05586
Species: Xenopus laevis

Structure of domain e4tlmA5

Domains in the same chain:

Download Pymol

e4tlmA3 A:23-142,A:273-394 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmA4 A:143-272 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmA1 A:395-545,A:747-794 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmA2 A:550-648,A:795-833 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4tlmA5 A:648-746 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II

Domains in the same PDB:

e4tlmA3 A:23-142,A:273-394 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmA4 A:143-272 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmA1 A:395-545,A:747-794 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmA2 A:550-648,A:795-833 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4tlmA5 A:648-746 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmB2 B:26-142,B:281-388 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmB1 B:143-280 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmB3 B:394-521,B:745-803 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmB5 B:522-532,B:643-744 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmB4 B:542-639,B:798-828 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4tlmC3 C:23-142,C:273-394 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmC1 C:143-272 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmC4 C:395-481,C:503-533,C:747-794 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmC5 C:534-546,C:649-746 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmC2 C:550-648,C:795-826 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4tlmD5 D:30-142,D:281-393 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmD4 D:143-280 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4tlmD2 D:394-521,D:745-803 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmD1 D:522-532,D:643-744 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4tlmD3 D:533-562,D:585-642,D:804-828 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels

Structural contacts of domain e4tlmA5 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4tlmB3 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4tlmB3 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4tlmD2 A:X,Y,Z->D:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol