Domain ID e4tovV1

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  • A: beta barrels
  • X: Ribosomal protein L25-like
  • H: Ribosomal protein L25-like
  • T: Ribosomal protein L25-like
  • F: Ribosomal_L25p
UID: 001317382
Type: Automatic domain
Parent: e1dfuP1
Range: V:1-94
PDB: 4tov
PDB Description:
Species:

Structure of domain e4tovV1

Domains in the same chain:

e4tovV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like

Domains in the same PDB:

e4tov01 0:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4tov21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4tov31 3:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4tov41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4tov52 5:19-61,5:144-225 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4tov51 5:62-143 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4tovC1 C:2-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4tovC2 C:126-272 SH3 SH3 SH3
e4tovE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4tovF1 F:2-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4tovG1 G:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4tovG2 G:83-177 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4tovH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4tovI1 I:2-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4tovI2 I:73-142 HTH HTH Ribosomal protein L11, C-terminal domain
e4tovJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4tovK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4tovN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4tovO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4tovR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4tovS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4tovT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4tovU1 U:2-103 SH3 SH3 SH3
e4tovV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4tovW1 W:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4tovX1 X:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4tovY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4tovZ1 Z:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e4tovV1 of H-group "Ribosomal protein L25-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dfuP1 V:x,y,z->M:X,Y,Z Ribosomal protein L25-like Interaction Interface Pymol
e4tovS1 V:x,y,z->S:X-1/2,-Y-1/2,-Z Ribosomal protein L22 Interaction Interface Pymol