Domain ID e4tvxH1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: CRISPR system Cas5 homologs
  • T: CRISPR system Cas5 homologs
  • F: Cas_Cas5d
UID: 001488213
Type: Manual and representative domain
Range: H:1-219
PDB: 4tvx
PDB Description: CRISPR system Cascade subunit CasD
UniProt: Q46898
Species:

Structure of domain e4tvxH1

Domains in the same chain:

e4tvxH1 H:1-219 Alpha-beta plaits CRISPR system Cas5 homologs CRISPR system Cas5 homologs

Domains in the same PDB:

e4tvxA2 A:1-66 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4tvxA1 A:67-199 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4tvxB1 B:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxC1 C:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxD1 D:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxE1 E:2-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxF1 F:2-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxG1 G:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxH1 H:1-219 Alpha-beta plaits CRISPR system Cas5 homologs CRISPR system Cas5 homologs
e4tvxI1 I:3-496 Cas8-like Cascade subunit CasA/Cse1/Cas8 Cascade subunit CasA/Cse1/Cas8
e4tvxJ1 J:4-160 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2
e4tvxK1 K:0-160 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2
e4tvxM2 M:1-66 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4tvxM1 M:67-199 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4tvxN1 N:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxO1 O:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxP1 P:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxQ1 Q:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxR1 R:2-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxS1 S:2-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4tvxT1 T:1-219 Alpha-beta plaits CRISPR system Cas5 homologs CRISPR system Cas5 homologs
e4tvxU1 U:3-496 Cas8-like Cascade subunit CasA/Cse1/Cas8 Cascade subunit CasA/Cse1/Cas8
e4tvxV1 V:4-158 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2
e4tvxW1 W:4-160 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2

Structural contacts of domain e4tvxH1 of H-group "CRISPR system Cas5 homologs":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4tvxG1 H:x,y,z->G:X,Y,Z Cas7-related Interaction Interface Pymol
e4tvxI1 H:X,Y,Z->I:x,y,z Cascade subunit CasA/Cse1/Cas8 Interaction Interface Pymol
e4tvxU1 H:X-1/2,-Y-1/2,-Z->U:x,y,z Cascade subunit CasA/Cse1/Cas8 Interaction Interface Pymol
e4tvxN1 H:x,y,z->N:X,Y,Z Cas7-related Interaction Interface Pymol