Domain ID e4twdD1

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  • A: alpha bundles
  • X: Neurotransmitter-gated ion-channel transmembrane pore
  • H: Neurotransmitter-gated ion-channel transmembrane pore
  • T: Neurotransmitter-gated ion-channel transmembrane pore
  • F: Unmapped domains
UID: 001388988
Type: Automatic domain
Parent: e1oedA1
Range: D:200-317
Ligands: 377
PDB: 4twd
PDB Description: Cys-loop ligand-gated ion channel
UniProt: P0C7B7
Species: Dickeya chrysanthemi

Structure of domain e4twdD1

Domains in the same chain:

e4twdD2 D:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdD1 D:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Domains in the same PDB:

e4twdA2 A:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdA1 A:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdB2 B:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdB1 B:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdC2 C:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdC1 C:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdD2 D:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdD1 D:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdE2 E:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdE1 E:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdF2 F:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdF1 F:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdG2 G:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdG1 G:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdH2 H:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdH1 H:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdI2 I:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdI1 I:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4twdJ2 J:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4twdJ1 J:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Structural contacts of domain e4twdD1 of H-group "Neurotransmitter-gated ion-channel transmembrane pore":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4twdC2 D:x,y,z->C:X,Y,Z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4twdC1 D:x,y,z->C:X,Y,Z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e4twdE1 D:X,Y,Z->E:x,y,z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol