ECOD: domain e4u1wB3

Domain ID e4u1wB3

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Lig_chan-Glu_bd

UID:	001617992
Type:	Automatic domain
Parent:	e1mqiA3
Range:	B:392-497,B:731-784
Ligands:	FWF KAI
PDB:	4u1w
PDB Description:	Glutamate receptor 2
UniProt:	P19491
Hsap BLAST neighbor:	P42262
Species:	Rattus norvegicus

Domain
In chain context
In PDB context

Structure of domain e4u1wB3

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e4u1wA2	A:8-112,A:246-391	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wA3	A:113-165,A:186-245	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wA4	A:392-497,A:731-784	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wA1	A:498-506,A:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wA5	A:507-544,A:595-630,A:785-813	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels
e4u1wB2	B:9-112,B:245-383	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wB1	B:113-244	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wB3	B:392-497,B:731-784	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wB5	B:498-506,B:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wB4	B:509-544,B:593-628,B:785-817	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels
e4u1wC3	C:8-112,C:246-391	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wC2	C:113-245	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wC1	C:392-497,C:731-774	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wC5	C:498-506,C:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wC4	C:507-543,C:596-630,C:785-815	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels
e4u1wD2	D:8-112,D:246-391	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wD3	D:113-245	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u1wD4	D:392-497,D:731-784	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wD5	D:498-506,D:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u1wD1	D:507-543,D:595-630,D:785-816	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels

Structural contacts of domain e4u1wB3 of H-group "Periplasmic binding protein-like II":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4u1wA1	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4u1wA5	B:x,y,z->A:X,Y,Z	Voltage-gated ion channels	Interaction Interface Pymol
e4u1wC1	B:X,Y,Z->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4u1wD4	B:x,y,z->D:-X-1,Y-1/2,-Z-1/2	Periplasmic binding protein-like II	Interaction Interface Pymol
e4u1wA3	B:x,y,z->A:-X-1,Y-1/2,-Z-1/2	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e4u1wA2	B:x,y,z->A:-X-1,Y-1/2,-Z-1/2	Class I glutamine amidotransferase-like	Interaction Interface Pymol