ECOD: domain e4u2qB5

Domain ID e4u2qB5

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Lig_chan-Glu_bd

UID:	001622953
Type:	Automatic domain
Parent:	e1mqiA3
Range:	B:392-497,B:731-784
Ligands:	KAI
PDB:	4u2q
PDB Description:	Glutamate receptor 2
UniProt:	P19491
Hsap BLAST neighbor:	P42262
Species:	Rattus norvegicus

Domain
In chain context
In PDB context

Structure of domain e4u2qB5

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e4u2qA3	A:8-112,A:246-391	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qA5	A:113-164,A:185-245	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qA4	A:392-497,A:731-773	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qA1	A:498-506,A:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qA2	A:507-544,A:593-630,A:785-815	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels
e4u2qB1	B:9-112,B:246-391	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qB4	B:113-245	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qB5	B:392-497,B:731-784	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qB3	B:498-506,B:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qB2	B:507-544,B:593-630,B:785-815	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels
e4u2qC4	C:8-112,C:246-391	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qC2	C:113-245	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qC3	C:392-497,C:731-784	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qC5	C:498-506,C:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qC1	C:507-544,C:596-630,C:785-815	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels
e4u2qD2	D:8-112,D:246-391	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qD3	D:113-245	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e4u2qD1	D:392-497,D:731-784	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qD5	D:498-506,D:631-730	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4u2qD4	D:507-544,D:593-630,D:785-814	Voltage-gated ion channels	Voltage-gated ion channels	Voltage-gated ion channels

Structural contacts of domain e4u2qB5 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4u2qA2	B:x,y,z->A:X,Y,Z	Voltage-gated ion channels	Interaction Interface Pymol
e4u2qA1	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4u2qC3	B:X,Y,Z->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4u2qD1	B:x,y,z->D:-X+1,Y-1/2,-Z+3/2	Periplasmic binding protein-like II	Interaction Interface Pymol
e4u2qA3	B:x,y,z->A:-X+1,Y-1/2,-Z+3/2	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e4u2qA5	B:x,y,z->A:-X+1,Y-1/2,-Z+3/2	Class I glutamine amidotransferase-like	Interaction Interface Pymol