| UID: | 001874719 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2xgjA5 |
| Range: | A:675-802 |
| Ligands: | PG4 SO4 |
| PDB: | 4u4c |
| PDB Description: | ATP-dependent RNA helicase DOB1 |
| UniProt: | P47047 |
| Hsap BLAST neighbor: | P42285 |
| Species: |
Structure of domain e4u4cA6
Domains in the same chain:
| e4u4cA5 | A:117-323 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4u4cA1 | A:324-363,A:391-579 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4u4cA4 | A:578-608,A:874-910 | HTH | HTH | winged |
| e4u4cA3 | A:609-674,A:803-873 | Helical arch in Ski2-like helicases | Helical arch in Ski2-like helicases | Helical arch in Ski2-like helicases |
| e4u4cA6 | A:675-802 | SH3 | SH3 | SH3 |
| e4u4cA7 | A:911-1073 | Sec63 N-terminal subdomain-like | Sec63 N-terminal subdomain-like | Sec63 N-terminal subdomain-like |
Domains in the same PDB:
| e4u4cA5 | A:117-323 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4u4cA1 | A:324-363,A:391-579 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4u4cA4 | A:578-608,A:874-910 | HTH | HTH | winged |
| e4u4cA3 | A:609-674,A:803-873 | Helical arch in Ski2-like helicases | Helical arch in Ski2-like helicases | Helical arch in Ski2-like helicases |
| e4u4cA6 | A:675-802 | SH3 | SH3 | SH3 |
| e4u4cA7 | A:911-1073 | Sec63 N-terminal subdomain-like | Sec63 N-terminal subdomain-like | Sec63 N-terminal subdomain-like |
Structural contacts of domain e4u4cA6 of H-group "SH3":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4u4cA5 | A:x,y,z->A:-X+1/2,-Y+1/2,Z-1/2 | P-loop domains-related | Interaction Interface Pymol |
| e4u4cA7 | A:x,y,z->A:-X,Y,-Z-1/2 | Sec63 N-terminal subdomain-like | Interaction Interface Pymol |
| e4u4cA7 | A:-X,Y,-Z-1/2->A:x,y,z | Sec63 N-terminal subdomain-like | Interaction Interface Pymol |
