Domain ID e4u4fD1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Unmapped domains
UID: 001523934
Type: Automatic domain
Parent: e1mqiA2
Range: D:498-506,D:631-730
Ligands: NWD
PDB: 4u4f
PDB Description: Glutamate receptor 2
UniProt: P19491
Hsap BLAST neighbor: P42262
Species: Rattus norvegicus

Structure of domain e4u4fD1

Domains in the same chain:

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e4u4fD3 D:10-114,D:248-391 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fD2 D:115-247 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fD5 D:392-497,D:731-773 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fD1 D:498-506,D:631-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fD4 D:507-544,D:568-624,D:770-817 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels

Domains in the same PDB:

e4u4fA1 A:10-114,A:248-391 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fA2 A:115-247 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fA3 A:392-497,A:731-773 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fA5 A:498-506,A:631-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fA4 A:507-544,A:568-630,A:785-817 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u4fB3 B:10-114,B:248-391 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fB2 B:115-247 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fB1 B:392-497,B:731-773 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fB5 B:498-506,B:631-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fB4 B:507-544,B:568-624,B:770-817 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u4fC3 C:10-114,C:248-391 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fC2 C:115-247 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fC5 C:392-497,C:731-773 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fC6 C:498-506,C:631-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fC4 C:507-544,C:568-624,C:770-817 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u4fD3 D:10-114,D:248-391 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fD2 D:115-247 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u4fD5 D:392-497,D:731-773 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fD1 D:498-506,D:631-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u4fD4 D:507-544,D:568-624,D:770-817 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels

Structural contacts of domain e4u4fD1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4u4fA3 D:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol