Domain ID e4u5bB1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Unmapped domains
UID: 001575933
Type: Automatic domain
Parent: e1mqiA2
Range: B:498-505,B:632-730
Ligands: FWF KAI
PDB: 4u5b
PDB Description: Glutamate receptor 2
UniProt: P19491
Hsap BLAST neighbor: P42262
Species: Rattus norvegicus

Structure of domain e4u5bB1

Domains in the same chain:

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e4u5bB4 B:6-111,B:244-383 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bB5 B:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bB3 B:384-497,B:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bB1 B:498-505,B:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bB2 B:506-542,B:597-627,B:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels

Domains in the same PDB:

e4u5bA3 A:6-111,A:244-382 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bA2 A:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bA1 A:383-497,A:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bA5 A:498-505,A:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bA4 A:506-542,A:597-627,A:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5bB4 B:6-111,B:244-383 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bB5 B:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bB3 B:384-497,B:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bB1 B:498-505,B:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bB2 B:506-542,B:597-627,B:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5bC4 C:6-111,C:244-381 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bC3 C:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bC1 C:382-497,C:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bC5 C:498-505,C:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bC2 C:506-542,C:597-627,C:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5bD3 D:6-111,D:244-381 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bD2 D:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5bD5 D:382-497,D:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bD1 D:498-505,D:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5bD4 D:506-542,D:597-627,D:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5bE1 E:2-86 con-ikot-ikot toxin con-ikot-ikot toxin con-ikot-ikot toxin
e4u5bF1 F:2-86 con-ikot-ikot toxin con-ikot-ikot toxin con-ikot-ikot toxin

Structural contacts of domain e4u5bB1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4u5bC1 B:X,Y,Z->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol