Domain ID e4u7uD1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related
  • T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related
  • F: CRISPR_assoc
UID: 001346746
Type: Automatic domain
Parent: e3qrpA2
Range: D:67-199
PDB: 4u7u
PDB Description: CRISPR system Cascade subunit CasE
UniProt: Q46897
Species:

Structure of domain e4u7uD1

Domains in the same chain:

e4u7uD2 D:-1-66 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4u7uD1 D:67-199 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related

Domains in the same PDB:

e4u7uA1 A:1-495 Cas8-like Cascade subunit CasA/Cse1/Cas8 Cascade subunit CasA/Cse1/Cas8
e4u7uB1 B:3-159 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2
e4u7uC1 C:4-160 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2
e4u7uD2 D:-1-66 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4u7uD1 D:67-199 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4u7uE1 E:1-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uF1 F:1-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uG1 G:1-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uH1 H:1-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uI1 I:1-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uJ1 J:1-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uK1 K:1-218 Alpha-beta plaits CRISPR system Cas5 homologs CRISPR system Cas5 homologs
e4u7uM1 M:1-495 Cas8-like Cascade subunit CasA/Cse1/Cas8 Cascade subunit CasA/Cse1/Cas8
e4u7uN1 N:4-159 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2
e4u7uO1 O:4-159 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2 CRISPR-associated protein Cse2
e4u7uP2 P:-1-66 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4u7uP1 P:67-199 Alpha-beta plaits CRISPR transcript (pre-crRNA) processing endoribonuclease-related CRISPR transcript (pre-crRNA) processing endoribonuclease-related
e4u7uQ1 Q:1-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uR1 R:1-363 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uS1 S:1-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uT1 T:1-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uU1 U:1-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uV1 V:1-362 Alpha-beta plaits Cas7-related CRISPR-associated protein Cas7/Csa2-related
e4u7uW1 W:1-218 Alpha-beta plaits CRISPR system Cas5 homologs CRISPR system Cas5 homologs

Structural contacts of domain e4u7uD1 of H-group "CRISPR transcript (pre-crRNA) processing endoribonuclease-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4u7uI1 D:X,Y,Z->I:x,y,z Cas7-related Interaction Interface Pymol
e4u7uC1 D:x,y,z->C:X,Y,Z CRISPR-associated protein Cse2 Interaction Interface Pymol
e4u7uQ1 D:x,y,z->Q:X-1,Y-1,Z Cas7-related Interaction Interface Pymol
e4u7uM1 D:x,y,z->M:X-1,Y-1,Z Cascade subunit CasA/Cse1/Cas8 Interaction Interface Pymol