| UID: | 000001925 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:5-126 |
| PDB: | 4ubp |
| PDB Description: | PROTEIN (UREASE (CHAIN B)) |
| UniProt: | P41021 |
| Species: | Sporosarcina pasteurii |
Structure of domain e4ubpB1
Domains in the same chain:
| e4ubpB1 | B:5-126 | Immunoglobulin-like beta-sandwich | Urease, beta-subunit | Urease, beta-subunit |
Domains in the same PDB:
Structural contacts of domain e4ubpB1 of H-group "Urease, beta-subunit":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4ubpC1 | B:X,Y,Z->C:x,y,z | Composite domain of metallo-dependent hydrolases | Interaction Interface Pymol |
| e4ubpC2 | B:X,Y,Z->C:x,y,z | TIM barrels | Interaction Interface Pymol |
| e4ubpC2 | B:x,y,z->C:-Y+1,X-Y+1,Z | TIM barrels | Interaction Interface Pymol |
| e4ubpA1 | B:x,y,z->A:X-Y+1,-Y+2,-Z+1 | Urease, gamma-subunit | Interaction Interface Pymol |
| e4ubpA1 | B:x,y,z->A:X,Y,Z | Urease, gamma-subunit | Interaction Interface Pymol |
| e4ubpB1 | B:x,y,z->B:X-Y+1,-Y+2,-Z+1 | Urease, beta-subunit | Interaction Interface Pymol |
| e4ubpB1 | B:X-Y+1,-Y+2,-Z+1->B:x,y,z | Urease, beta-subunit | Interaction Interface Pymol |
