ECOD: domain e4utvB2

Domain ID e4utvB2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: DHS-like NAD/FAD-binding domain
F: SIR2

UID:	001324257
Type:	Automatic domain
Parent:	e1m2kA2
Range:	B:33-146,B:208-298
Ligands:	DMS EPE NA ZN
PDB:	4utv
PDB Description:	NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL
UniProt:	Q6DHI5
Hsap BLAST neighbor:	Q9NXA8
Species:	Danio rerio

Domain
In chain context
In PDB context

Structure of domain e4utvB2

Domains in the same chain:

Download Pymol

e4utvB2	B:33-146,B:208-298	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e4utvB1	B:147-207	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e4utvA1	A:35-139,A:201-298	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e4utvA2	A:140-200	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4utvB2	B:33-146,B:208-298	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e4utvB1	B:147-207	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e4utvB2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4utvA1	B:x,y,z->A:X-Y,X,Z-1/6	Rossmann-related	Interaction Interface Pymol
e4utvA1	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e4utvA2	B:x,y,z->A:X,Y,Z	Rubredoxin-related	Interaction Interface Pymol
e4utvB1	B:x,y,z->B:X,X-Y+1,-Z-1/6	Rubredoxin-related	Interaction Interface Pymol
e4utvB2	B:x,y,z->B:X,X-Y+1,-Z-1/6	Rossmann-related	Interaction Interface Pymol
e4utvB2	B:X,X-Y+1,-Z-1/6->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e4utvB1	B:X,X-Y+1,-Z-1/6->B:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e4utvA2	B:x,y,z->A:X-1,X-Y,-Z-1/6	Rubredoxin-related	Interaction Interface Pymol