Domain ID e4uubB2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: SIR2
UID: 001324281
Type: Automatic domain
Parent: e1m2kA2
Range: B:33-146,B:208-298
Ligands: DMS EDO EPE NA ZN
PDB: 4uub
PDB Description: NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL
UniProt: Q6DHI5
Hsap BLAST neighbor: Q9NXA8
Species: Danio rerio

Structure of domain e4uubB2

Structural contacts of domain e4uubB2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4uubA1 B:x,y,z->A:X-Y,X,Z-1/6 Rossmann-related Interaction Interface Pymol
e4uubA2 B:x,y,z->A:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e4uubA1 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e4uubB1 B:x,y,z->B:X,X-Y-1,-Z-1/6 Rubredoxin-related Interaction Interface Pymol
e4uubB2 B:x,y,z->B:X,X-Y-1,-Z-1/6 Rossmann-related Interaction Interface Pymol
e4uubB1 B:X,X-Y-1,-Z-1/6->B:x,y,z Rubredoxin-related Interaction Interface Pymol
e4uubB2 B:X,X-Y-1,-Z-1/6->B:x,y,z Rossmann-related Interaction Interface Pymol
e4uubA2 B:X-1,X-Y-1,-Z-1/6->A:x,y,z Rubredoxin-related Interaction Interface Pymol
e4uubA1 B:x,y,z->A:X,X-Y,-Z-1/6 Rossmann-related Interaction Interface Pymol