| UID: | 001324281 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1m2kA2 |
| Range: | B:33-146,B:208-298 |
| Ligands: | DMS EDO EPE NA ZN |
| PDB: | 4uub |
| PDB Description: | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL |
| UniProt: | Q6DHI5 |
| Hsap BLAST neighbor: | Q9NXA8 |
| Species: | Danio rerio |
Structure of domain e4uubB2
Domains in the same chain:
| e4uubB2 | B:33-146,B:208-298 | Rossmann-like | Rossmann-related | DHS-like NAD/FAD-binding domain |
| e4uubB1 | B:147-207 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Domains in the same PDB:
| e4uubA1 | A:35-139,A:201-298 | Rossmann-like | Rossmann-related | DHS-like NAD/FAD-binding domain |
| e4uubA2 | A:140-200 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e4uubB2 | B:33-146,B:208-298 | Rossmann-like | Rossmann-related | DHS-like NAD/FAD-binding domain |
| e4uubB1 | B:147-207 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Structural contacts of domain e4uubB2 of H-group "Rossmann-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4uubA1 | B:x,y,z->A:X-Y,X,Z-1/6 | Rossmann-related | Interaction Interface Pymol |
| e4uubA2 | B:x,y,z->A:X,Y,Z | Rubredoxin-related | Interaction Interface Pymol |
| e4uubA1 | B:x,y,z->A:X,Y,Z | Rossmann-related | Interaction Interface Pymol |
| e4uubB1 | B:x,y,z->B:X,X-Y-1,-Z-1/6 | Rubredoxin-related | Interaction Interface Pymol |
| e4uubB2 | B:x,y,z->B:X,X-Y-1,-Z-1/6 | Rossmann-related | Interaction Interface Pymol |
| e4uubB1 | B:X,X-Y-1,-Z-1/6->B:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e4uubB2 | B:X,X-Y-1,-Z-1/6->B:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e4uubA2 | B:X-1,X-Y-1,-Z-1/6->A:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e4uubA1 | B:x,y,z->A:X,X-Y,-Z-1/6 | Rossmann-related | Interaction Interface Pymol |
