Domain ID e5b43A1

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  • A: beta barrels
  • X: OB-fold
  • H: Small protein B (SmpB)
  • T: Small protein B (SmpB)
  • F: Unmapped domains
UID: 001830955
Type: Manual and representative domain
Range: A:1-48,A:527-597,A:719-885
Ligands: EDO NA
PDB: 5b43
PDB Description: CRISPR-associated endonuclease Cpf1
UniProt: U2UMQ6
Species: Acidaminococcus sp. BV3L6

Structure of domain e5b43A1

Domains in the same chain:

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e5b43A1 A:1-48,A:527-597,A:719-885 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5b43A5 A:49-319 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5b43A6 A:320-526 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5b43A2 A:598-718 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5b43A3 A:886-1072,A:1259-1307 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5b43A4 A:1073-1258 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain

Domains in the same PDB:

e5b43A1 A:1-48,A:527-597,A:719-885 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5b43A5 A:49-319 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5b43A6 A:320-526 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5b43A2 A:598-718 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5b43A3 A:886-1072,A:1259-1307 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5b43A4 A:1073-1258 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain