ECOD: domain e5epiB3

Domain ID e5epiB3

A: extended segments
X: RNA polymerase PB1 C-terminal fragment
H: RNA polymerase PB1 C-terminal fragment
T: RNA polymerase PB1 C-terminal fragment
F: Flu_PB1

UID:	001724509
Type:	Automatic domain
Parent:	e3a1gA1
Range:	B:669-763
PDB:	5epi
PDB Description:	RNA-directed RNA polymerase catalytic subunit
UniProt:	Q5V8Y6
Species:

Domains in the same chain:

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e5epiB1	B:1-486	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5epiB2	B:487-668	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5epiB3	B:669-763	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment

Domains in the same PDB:

e5epiA1	A:0-235	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5epiA2	A:236-716	Polymerase acidic protein	Polymerase acidic protein	Polymerase acidic protein
e5epiB1	B:1-486	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5epiB2	B:487-668	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5epiB3	B:669-763	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment
e5epiC1	C:1-37	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment
e5epiC2	C:38-108	a+b domain in PB2	a+b domain in PB2	a+b domain in PB2
e5epiC3	C:109-249	Middle domain in PB2	Middle domain in PB2	Middle domain in PB2
e5epiC4	C:250-321	Helical domain in PB2	Helical domain in PB2	Helical domain in PB2
e5epiC5	C:322-534	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain
e5epiC6	C:535-679	PB2 '627' domain-related	PB2 '627' domain-related	Polymerase basic protein 2 (PB2) '627' domain
e5epiC7	C:693-775	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like
e5epiE2	E:0-235	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5epiE1	E:236-716	Polymerase acidic protein	Polymerase acidic protein	Polymerase acidic protein
e5epiF2	F:1-486	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5epiF1	F:487-668	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5epiF3	F:669-763	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment
e5epiG6	G:0-37	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment
e5epiG1	G:38-108	a+b domain in PB2	a+b domain in PB2	a+b domain in PB2
e5epiG5	G:109-249	Middle domain in PB2	Middle domain in PB2	Middle domain in PB2
e5epiG2	G:250-320	Helical domain in PB2	Helical domain in PB2	Helical domain in PB2
e5epiG4	G:321-489	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain
e5epiG3	G:490-688	PB2 '627' domain-related	PB2 '627' domain-related	Polymerase basic protein 2 (PB2) '627' domain
e5epiG7	G:689-773	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like
e5epiI2	I:0-235	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5epiI1	I:236-724	Polymerase acidic protein	Polymerase acidic protein	Polymerase acidic protein
e5epiJ1	J:1-486	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5epiJ3	J:487-668	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5epiJ2	J:669-763	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment
e5epiK6	K:0-37	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment
e5epiK3	K:38-108	a+b domain in PB2	a+b domain in PB2	a+b domain in PB2
e5epiK2	K:109-249	Middle domain in PB2	Middle domain in PB2	Middle domain in PB2
e5epiK4	K:250-320	Helical domain in PB2	Helical domain in PB2	Helical domain in PB2
e5epiK1	K:321-489	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain
e5epiK5	K:490-688	PB2 '627' domain-related	PB2 '627' domain-related	Polymerase basic protein 2 (PB2) '627' domain
e5epiK7	K:689-773	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like
e5epiM2	M:0-235	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5epiM1	M:236-716	Polymerase acidic protein	Polymerase acidic protein	Polymerase acidic protein
e5epiN2	N:1-486	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5epiN1	N:487-668	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5epiN3	N:669-763	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment
e5epiO7	O:0-37	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment
e5epiO3	O:38-108	a+b domain in PB2	a+b domain in PB2	a+b domain in PB2
e5epiO6	O:109-249	Middle domain in PB2	Middle domain in PB2	Middle domain in PB2
e5epiO2	O:250-320	Helical domain in PB2	Helical domain in PB2	Helical domain in PB2
e5epiO4	O:321-489	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain
e5epiO1	O:490-688	PB2 '627' domain-related	PB2 '627' domain-related	Polymerase basic protein 2 (PB2) '627' domain
e5epiO5	O:689-773	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like
e5epiQ2	Q:0-235	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5epiQ1	Q:236-716	Polymerase acidic protein	Polymerase acidic protein	Polymerase acidic protein
e5epiR2	R:1-486	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5epiR3	R:487-668	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5epiR1	R:669-763	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment
e5epiS1	S:0-37	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment
e5epiS6	S:38-108	a+b domain in PB2	a+b domain in PB2	a+b domain in PB2
e5epiS7	S:109-249	Middle domain in PB2	Middle domain in PB2	Middle domain in PB2
e5epiS2	S:250-320	Helical domain in PB2	Helical domain in PB2	Helical domain in PB2
e5epiS4	S:321-489	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain
e5epiS5	S:490-688	PB2 '627' domain-related	PB2 '627' domain-related	Polymerase basic protein 2 (PB2) '627' domain
e5epiS3	S:689-773	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like
e5epiU1	U:0-235	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5epiU2	U:236-716	Polymerase acidic protein	Polymerase acidic protein	Polymerase acidic protein
e5epiV3	V:1-486	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5epiV2	V:487-668	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5epiV1	V:669-763	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment	RNA polymerase PB1 C-terminal fragment
e5epiW6	W:0-37	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment	RNA polymerase PB2 N-terminal fragment
e5epiW4	W:38-108	a+b domain in PB2	a+b domain in PB2	a+b domain in PB2
e5epiW2	W:109-249	Middle domain in PB2	Middle domain in PB2	Middle domain in PB2
e5epiW5	W:250-321	Helical domain in PB2	Helical domain in PB2	Helical domain in PB2
e5epiW7	W:322-538	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain	Polymerase basic protein 2 cap-binding domain
e5epiW3	W:693-773	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like