Domain ID e5epiB3

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  • A: extended segments
  • X: RNA polymerase PB1 C-terminal fragment
  • H: RNA polymerase PB1 C-terminal fragment
  • T: RNA polymerase PB1 C-terminal fragment
  • F: Flu_PB1
UID: 001724509
Type: Automatic domain
Parent: e3a1gA1
Range: B:669-763
PDB: 5epi
PDB Description: RNA-directed RNA polymerase catalytic subunit
UniProt: Q5V8Y6
Species:

Structure of domain e5epiB3

Domains in the same chain:

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e5epiB1 B:1-486 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5epiB2 B:487-668 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5epiB3 B:669-763 RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment

Domains in the same PDB:

e5epiA1 A:0-235 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5epiA2 A:236-716 Polymerase acidic protein Polymerase acidic protein Polymerase acidic protein
e5epiB1 B:1-486 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5epiB2 B:487-668 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5epiB3 B:669-763 RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment
e5epiC1 C:1-37 RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment
e5epiC2 C:38-108 a+b domain in PB2 a+b domain in PB2 a+b domain in PB2
e5epiC3 C:109-249 Middle domain in PB2 Middle domain in PB2 Middle domain in PB2
e5epiC4 C:250-321 Helical domain in PB2 Helical domain in PB2 Helical domain in PB2
e5epiC5 C:322-534 Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain
e5epiC6 C:535-679 PB2 '627' domain-related PB2 '627' domain-related Polymerase basic protein 2 (PB2) '627' domain
e5epiC7 C:693-775 PB2 C-terminal domain-like PB2 C-terminal domain-like PB2 C-terminal domain-like
e5epiE2 E:0-235 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5epiE1 E:236-716 Polymerase acidic protein Polymerase acidic protein Polymerase acidic protein
e5epiF2 F:1-486 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5epiF1 F:487-668 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5epiF3 F:669-763 RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment
e5epiG6 G:0-37 RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment
e5epiG1 G:38-108 a+b domain in PB2 a+b domain in PB2 a+b domain in PB2
e5epiG5 G:109-249 Middle domain in PB2 Middle domain in PB2 Middle domain in PB2
e5epiG2 G:250-320 Helical domain in PB2 Helical domain in PB2 Helical domain in PB2
e5epiG4 G:321-489 Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain
e5epiG3 G:490-688 PB2 '627' domain-related PB2 '627' domain-related Polymerase basic protein 2 (PB2) '627' domain
e5epiG7 G:689-773 PB2 C-terminal domain-like PB2 C-terminal domain-like PB2 C-terminal domain-like
e5epiI2 I:0-235 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5epiI1 I:236-724 Polymerase acidic protein Polymerase acidic protein Polymerase acidic protein
e5epiJ1 J:1-486 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5epiJ3 J:487-668 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5epiJ2 J:669-763 RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment
e5epiK6 K:0-37 RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment
e5epiK3 K:38-108 a+b domain in PB2 a+b domain in PB2 a+b domain in PB2
e5epiK2 K:109-249 Middle domain in PB2 Middle domain in PB2 Middle domain in PB2
e5epiK4 K:250-320 Helical domain in PB2 Helical domain in PB2 Helical domain in PB2
e5epiK1 K:321-489 Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain
e5epiK5 K:490-688 PB2 '627' domain-related PB2 '627' domain-related Polymerase basic protein 2 (PB2) '627' domain
e5epiK7 K:689-773 PB2 C-terminal domain-like PB2 C-terminal domain-like PB2 C-terminal domain-like
e5epiM2 M:0-235 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5epiM1 M:236-716 Polymerase acidic protein Polymerase acidic protein Polymerase acidic protein
e5epiN2 N:1-486 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5epiN1 N:487-668 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5epiN3 N:669-763 RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment
e5epiO7 O:0-37 RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment
e5epiO3 O:38-108 a+b domain in PB2 a+b domain in PB2 a+b domain in PB2
e5epiO6 O:109-249 Middle domain in PB2 Middle domain in PB2 Middle domain in PB2
e5epiO2 O:250-320 Helical domain in PB2 Helical domain in PB2 Helical domain in PB2
e5epiO4 O:321-489 Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain
e5epiO1 O:490-688 PB2 '627' domain-related PB2 '627' domain-related Polymerase basic protein 2 (PB2) '627' domain
e5epiO5 O:689-773 PB2 C-terminal domain-like PB2 C-terminal domain-like PB2 C-terminal domain-like
e5epiQ2 Q:0-235 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5epiQ1 Q:236-716 Polymerase acidic protein Polymerase acidic protein Polymerase acidic protein
e5epiR2 R:1-486 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5epiR3 R:487-668 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5epiR1 R:669-763 RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment
e5epiS1 S:0-37 RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment
e5epiS6 S:38-108 a+b domain in PB2 a+b domain in PB2 a+b domain in PB2
e5epiS7 S:109-249 Middle domain in PB2 Middle domain in PB2 Middle domain in PB2
e5epiS2 S:250-320 Helical domain in PB2 Helical domain in PB2 Helical domain in PB2
e5epiS4 S:321-489 Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain
e5epiS5 S:490-688 PB2 '627' domain-related PB2 '627' domain-related Polymerase basic protein 2 (PB2) '627' domain
e5epiS3 S:689-773 PB2 C-terminal domain-like PB2 C-terminal domain-like PB2 C-terminal domain-like
e5epiU1 U:0-235 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5epiU2 U:236-716 Polymerase acidic protein Polymerase acidic protein Polymerase acidic protein
e5epiV3 V:1-486 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5epiV2 V:487-668 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5epiV1 V:669-763 RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment RNA polymerase PB1 C-terminal fragment
e5epiW6 W:0-37 RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment RNA polymerase PB2 N-terminal fragment
e5epiW4 W:38-108 a+b domain in PB2 a+b domain in PB2 a+b domain in PB2
e5epiW2 W:109-249 Middle domain in PB2 Middle domain in PB2 Middle domain in PB2
e5epiW5 W:250-321 Helical domain in PB2 Helical domain in PB2 Helical domain in PB2
e5epiW7 W:322-538 Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain Polymerase basic protein 2 cap-binding domain
e5epiW3 W:693-773 PB2 C-terminal domain-like PB2 C-terminal domain-like PB2 C-terminal domain-like